From cdddbad608b50f1bc1c0a3b51260f383c44b978a Mon Sep 17 00:00:00 2001 From: Colin Date: Wed, 29 Jan 2025 23:53:27 -0500 Subject: [PATCH] Change peerDeps into deps --- packages/app-core/package.json | 10 +++++----- packages/core/package.json | 10 +++++----- packages/embedded-core/package.json | 10 +++++----- packages/product-core/package.json | 10 +++++----- packages/sv-core/package.json | 10 +++++----- packages/text-indexing/package.json | 10 +++++----- packages/web-core/package.json | 10 +++++----- plugins/alignments/package.json | 12 ++++++------ plugins/arc/package.json | 8 +++++--- plugins/authentication/package.json | 10 +++++----- plugins/bed/package.json | 4 +--- plugins/breakpoint-split-view/package.json | 10 +++++----- plugins/circular-view/package.json | 10 +++++----- plugins/comparative-adapters/package.json | 10 +++++----- plugins/config/package.json | 10 +++++----- plugins/data-management/package.json | 8 ++++---- plugins/dotplot-view/package.json | 10 +++++----- plugins/gccontent/package.json | 6 ++++-- plugins/gff3/package.json | 4 +--- plugins/grid-bookmark/package.json | 8 ++++---- plugins/gtf/package.json | 8 ++++---- plugins/hic/package.json | 8 ++++---- plugins/jobs-management/package.json | 8 ++++---- plugins/legacy-jbrowse/package.json | 4 +--- plugins/linear-comparative-view/package.json | 10 +++++----- plugins/linear-genome-view/package.json | 12 ++++++------ plugins/lollipop/package.json | 6 ++++-- plugins/menus/package.json | 10 +++++----- plugins/rdf/package.json | 4 +--- plugins/sequence/package.json | 8 ++++---- plugins/spreadsheet-view/package.json | 10 +++++----- plugins/sv-inspector/package.json | 10 +++++----- plugins/svg/package.json | 6 ++++-- plugins/text-indexing/package.json | 8 ++++---- plugins/trix/package.json | 10 +++++----- plugins/variants/package.json | 8 ++++---- plugins/wiggle/package.json | 8 ++++---- 37 files changed, 159 insertions(+), 159 deletions(-) diff --git a/packages/app-core/package.json b/packages/app-core/package.json index fec5e5b2cc..f33f2195ff 100644 --- a/packages/app-core/package.json +++ b/packages/app-core/package.json @@ -45,17 +45,17 @@ "@jbrowse/product-core": "^3.0.0", "@mui/icons-material": "^6.0.0", "@mui/material": "^6.0.0", - "copy-to-clipboard": "^3.3.1" - }, - "peerDependencies": { + "copy-to-clipboard": "^3.3.1", "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=17.0.0", - "react-dom": ">=17.0.0", "rxjs": "^7.0.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=18.0.0", + "react-dom": ">=18.0.0" + }, "publishConfig": { "access": "public" } diff --git a/packages/core/package.json b/packages/core/package.json index 64e0aaabe2..46dd1d9a3a 100644 --- a/packages/core/package.json +++ b/packages/core/package.json @@ -53,18 +53,18 @@ "rbush": "^3.0.1", "react-draggable": "^4.4.5", "serialize-error": "^8.0.0", - "source-map-js": "^1.0.2" - }, - "peerDependencies": { + "source-map-js": "^1.0.2", "@mui/material": "^6.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", - "react-dom": ">=16.8.0", "rxjs": "^7.0.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=16.8.0", + "react-dom": ">=16.8.0" + }, "publishConfig": { "access": "public", "directory": "dist" diff --git a/packages/embedded-core/package.json b/packages/embedded-core/package.json index 61a12425c9..6c2d4e2781 100644 --- a/packages/embedded-core/package.json +++ b/packages/embedded-core/package.json @@ -46,17 +46,17 @@ "@jbrowse/product-core": "^3.0.0", "@mui/icons-material": "^6.0.0", "@mui/material": "^6.0.0", - "copy-to-clipboard": "^3.3.1" - }, - "peerDependencies": { + "copy-to-clipboard": "^3.3.1", "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=17.0.0", - "react-dom": ">=17.0.0", "rxjs": "^7.0.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=18.0.0", + "react-dom": ">=18.0.0" + }, "publishConfig": { "access": "public" } diff --git a/packages/product-core/package.json b/packages/product-core/package.json index 52b98131d5..9925013089 100644 --- a/packages/product-core/package.json +++ b/packages/product-core/package.json @@ -48,17 +48,17 @@ "@mui/material": "^6.0.0", "copy-to-clipboard": "^3.3.1", "librpc-web-mod": "^1.0.0", - "serialize-error": "^8.0.0" - }, - "peerDependencies": { + "serialize-error": "^8.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=17.0.0", - "react-dom": ">=17.0.0", "rxjs": "^7.0.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=18.0.0", + "react-dom": ">=18.0.0" + }, "publishConfig": { "access": "public" } diff --git a/packages/sv-core/package.json b/packages/sv-core/package.json index b449af23e4..bb1ad077da 100644 --- a/packages/sv-core/package.json +++ b/packages/sv-core/package.json @@ -45,17 +45,17 @@ "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-linear-genome-view": "^3.0.0", "@mui/icons-material": "^6.0.0", - "@mui/material": "^6.0.0" - }, - "peerDependencies": { + "@mui/material": "^6.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=17.0.0", - "react-dom": ">=17.0.0", "rxjs": "^7.0.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=18.0.0", + "react-dom": ">=18.0.0" + }, "publishConfig": { "access": "public" } diff --git a/packages/text-indexing/package.json b/packages/text-indexing/package.json index 9e44c6f33d..41b4d68419 100644 --- a/packages/text-indexing/package.json +++ b/packages/text-indexing/package.json @@ -45,16 +45,16 @@ "@jbrowse/core": "^3.0.0", "ixixx": "^2.0.1", "node-fetch": "^2.6.0", - "sanitize-filename": "^1.6.3" - }, - "peerDependencies": { + "sanitize-filename": "^1.6.3", "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", - "react-dom": ">=16.8.0", "rxjs": "^7.0.0" }, + "peerDependencies": { + "react": ">=16.8.0", + "react-dom": ">=16.8.0" + }, "publishConfig": { "access": "public" } diff --git a/packages/web-core/package.json b/packages/web-core/package.json index ca0916ef28..d49b98808e 100644 --- a/packages/web-core/package.json +++ b/packages/web-core/package.json @@ -46,17 +46,17 @@ "@jbrowse/product-core": "^3.0.0", "@mui/icons-material": "^6.0.0", "@mui/material": "^6.0.0", - "copy-to-clipboard": "^3.3.1" - }, - "peerDependencies": { + "copy-to-clipboard": "^3.3.1", "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=17.0.0", - "react-dom": ">=17.0.0", "rxjs": "^7.0.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=18.0.0", + "react-dom": ">=18.0.0" + }, "publishConfig": { "access": "public" } diff --git a/plugins/alignments/package.json b/plugins/alignments/package.json index e5728358d8..f833f692ac 100644 --- a/plugins/alignments/package.json +++ b/plugins/alignments/package.json @@ -43,9 +43,7 @@ "canvas2svg": "^1.0.16", "copy-to-clipboard": "^3.3.1", "fast-deep-equal": "^3.1.3", - "generic-filehandle2": "^1.0.0" - }, - "peerDependencies": { + "generic-filehandle2": "^1.0.0", "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-linear-genome-view": "^3.0.0", "@jbrowse/plugin-wiggle": "^3.0.0", @@ -53,9 +51,11 @@ "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", - "rxjs": "^7.0.0", - "tss-react": "^4.0.0" + "tss-react": "^4.0.0", + "rxjs": "^7.0.0" + }, + "peerDependencies": { + "react": ">=18.0.0" }, "publishConfig": { "access": "public" diff --git a/plugins/arc/package.json b/plugins/arc/package.json index d71edf4b77..1651ad82a2 100644 --- a/plugins/arc/package.json +++ b/plugins/arc/package.json @@ -35,7 +35,7 @@ "build:commonjs": "tsc --build tsconfig.build.commonjs.json", "clean": "rimraf dist esm *.tsbuildinfo" }, - "peerDependencies": { + "dependencies": { "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-linear-genome-view": "^3.0.0", "@jbrowse/plugin-wiggle": "^3.0.0", @@ -43,10 +43,12 @@ "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", - "react-dom": ">=16.8.0", "rxjs": "^7.0.0" }, + "peerDependencies": { + "react": ">=16.8.0", + "react-dom": ">=16.8.0" + }, "distModule": "esm/index.js", "srcModule": "src/index.ts", "module": "", diff --git a/plugins/authentication/package.json b/plugins/authentication/package.json index 7746c9debc..76ff6881a7 100644 --- a/plugins/authentication/package.json +++ b/plugins/authentication/package.json @@ -37,18 +37,18 @@ }, "dependencies": { "crypto-js": "^4.2.0", - "generic-filehandle2": "^1.0.0" - }, - "peerDependencies": { + "generic-filehandle2": "^1.0.0", "@jbrowse/core": "^3.0.0", "@mui/material": "^6.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", - "react-dom": ">=16.8.0", "rxjs": "^7.0.0" }, + "peerDependencies": { + "react": ">=16.8.0", + "react-dom": ">=16.8.0" + }, "publishConfig": { "access": "public" }, diff --git a/plugins/bed/package.json b/plugins/bed/package.json index 4c06d9fcdc..169219040c 100644 --- a/plugins/bed/package.json +++ b/plugins/bed/package.json @@ -40,9 +40,7 @@ "@gmod/bbi": "^6.0.0", "@gmod/bed": "^2.1.2", "@gmod/bgzf-filehandle": "^2.0.1", - "@gmod/tabix": "^2.0.0" - }, - "peerDependencies": { + "@gmod/tabix": "^2.0.0", "@jbrowse/core": "^3.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", diff --git a/plugins/breakpoint-split-view/package.json b/plugins/breakpoint-split-view/package.json index dcaac0949f..82845a0ed2 100644 --- a/plugins/breakpoint-split-view/package.json +++ b/plugins/breakpoint-split-view/package.json @@ -39,19 +39,19 @@ "@gmod/vcf": "^6.0.0", "@mui/icons-material": "^6.0.0", "@types/file-saver": "^2.0.1", - "file-saver": "^2.0.0" - }, - "peerDependencies": { + "file-saver": "^2.0.0", "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-linear-genome-view": "^3.0.0", "@mui/material": "^6.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.4", - "react-dom": ">=16.8.4", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=16.8.4", + "react-dom": ">=16.8.4" + }, "distModule": "esm/index.js", "srcModule": "src/index.ts", "module": "", diff --git a/plugins/circular-view/package.json b/plugins/circular-view/package.json index ab0a7348c6..1e1728e6d9 100644 --- a/plugins/circular-view/package.json +++ b/plugins/circular-view/package.json @@ -38,18 +38,18 @@ "dependencies": { "@mui/icons-material": "^6.0.0", "@types/file-saver": "^2.0.0", - "file-saver": "^2.0.0" - }, - "peerDependencies": { + "file-saver": "^2.0.0", "@jbrowse/core": "^3.0.0", "@mui/material": "^6.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", - "react-dom": ">=16.8.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=16.8.0", + "react-dom": ">=16.8.0" + }, "publishConfig": { "access": "public" }, diff --git a/plugins/comparative-adapters/package.json b/plugins/comparative-adapters/package.json index 7ad5db3bdc..ae11043c1c 100644 --- a/plugins/comparative-adapters/package.json +++ b/plugins/comparative-adapters/package.json @@ -38,9 +38,7 @@ "dependencies": { "@gmod/bgzf-filehandle": "^2.0.1", "@gmod/tabix": "^2.0.0", - "generic-filehandle2": "^1.0.0" - }, - "peerDependencies": { + "generic-filehandle2": "^1.0.0", "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-alignments": "^3.0.0", "@jbrowse/plugin-linear-genome-view": "^3.0.0", @@ -48,10 +46,12 @@ "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", - "react-dom": ">=16.8.0", "rxjs": "^7.0.0" }, + "peerDependencies": { + "react": ">=16.8.0", + "react-dom": ">=16.8.0" + }, "distModule": "esm/index.js", "srcModule": "src/index.ts", "module": "", diff --git a/plugins/config/package.json b/plugins/config/package.json index 2850a1844f..507772977b 100644 --- a/plugins/config/package.json +++ b/plugins/config/package.json @@ -37,19 +37,19 @@ }, "dependencies": { "@mui/icons-material": "^6.0.0", - "pluralize": "^8.0.0" - }, - "peerDependencies": { + "pluralize": "^8.0.0", "@jbrowse/core": "^3.0.0", "@mui/material": "^6.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", - "react-dom": ">=16.8.0", "rxjs": "^7.0.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=16.8.0", + "react-dom": ">=16.8.0" + }, "publishConfig": { "access": "public" }, diff --git a/plugins/data-management/package.json b/plugins/data-management/package.json index ca45442463..1f245b83d9 100644 --- a/plugins/data-management/package.json +++ b/plugins/data-management/package.json @@ -42,9 +42,7 @@ "deepmerge": "^4.3.1", "react-virtualized-auto-sizer": "^1.0.2", "react-vtree": "^3.0.0-beta.1", - "react-window": "^1.8.6" - }, - "peerDependencies": { + "react-window": "^1.8.6", "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-config": "^3.0.0", "@jbrowse/product-core": "^3.0.0", @@ -52,9 +50,11 @@ "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=16.8.0" + }, "publishConfig": { "access": "public" }, diff --git a/plugins/dotplot-view/package.json b/plugins/dotplot-view/package.json index 4a060ad4fd..d854f9fbf8 100644 --- a/plugins/dotplot-view/package.json +++ b/plugins/dotplot-view/package.json @@ -39,20 +39,20 @@ "@mui/icons-material": "^6.0.0", "@mui/x-data-grid": "^7.0.0", "@types/file-saver": "^2.0.1", - "file-saver": "^2.0.0" - }, - "peerDependencies": { + "file-saver": "^2.0.0", "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-alignments": "^3.0.0", "@mui/material": "^6.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", - "react-dom": ">=16.8.0", "rxjs": "^7.0.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=16.8.0", + "react-dom": ">=16.8.0" + }, "distModule": "esm/index.js", "srcModule": "src/index.ts", "module": "", diff --git a/plugins/gccontent/package.json b/plugins/gccontent/package.json index 8ea1a5817b..4bb3cf730f 100644 --- a/plugins/gccontent/package.json +++ b/plugins/gccontent/package.json @@ -35,7 +35,7 @@ "build:commonjs": "tsc --build tsconfig.build.commonjs.json", "clean": "rimraf dist esm *.tsbuildinfo" }, - "peerDependencies": { + "dependencies": { "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-linear-genome-view": "^3.0.0", "@jbrowse/plugin-sequence": "^3.0.0", @@ -44,9 +44,11 @@ "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", "rxjs": "^7.0.0" }, + "peerDependencies": { + "react": ">=16.8.0" + }, "publishConfig": { "access": "public" }, diff --git a/plugins/gff3/package.json b/plugins/gff3/package.json index 8a58e047f2..2f004e67b9 100644 --- a/plugins/gff3/package.json +++ b/plugins/gff3/package.json @@ -39,9 +39,7 @@ "@flatten-js/interval-tree": "^1.0.15", "@gmod/bgzf-filehandle": "^2.0.1", "@gmod/tabix": "^2.0.0", - "gff-nostream": "^1.3.3" - }, - "peerDependencies": { + "gff-nostream": "^1.3.3", "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-linear-genome-view": "^3.0.0", "@mui/material": "^6.0.0", diff --git a/plugins/grid-bookmark/package.json b/plugins/grid-bookmark/package.json index 2aa2e3a425..6ea70ad675 100644 --- a/plugins/grid-bookmark/package.json +++ b/plugins/grid-bookmark/package.json @@ -39,9 +39,7 @@ "@mui/icons-material": "^6.0.0", "@types/file-saver": "^2.0.1", "copy-to-clipboard": "^3.3.1", - "file-saver": "^2.0.0" - }, - "peerDependencies": { + "file-saver": "^2.0.0", "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-config": "^3.0.0", "@jbrowse/plugin-linear-genome-view": "^3.0.0", @@ -50,9 +48,11 @@ "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=16.8.0" + }, "publishConfig": { "access": "public" }, diff --git a/plugins/gtf/package.json b/plugins/gtf/package.json index 6a23a0e96f..beffe2cdeb 100644 --- a/plugins/gtf/package.json +++ b/plugins/gtf/package.json @@ -38,18 +38,18 @@ "dependencies": { "@flatten-js/interval-tree": "^1.0.15", "@gmod/bgzf-filehandle": "^2.0.1", - "gtf-nostream": "^1.0.0" - }, - "peerDependencies": { + "gtf-nostream": "^1.0.0", "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-linear-genome-view": "^3.0.0", "@mui/material": "^6.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", "rxjs": "^7.0.0" }, + "peerDependencies": { + "react": ">=16.8.0" + }, "publishConfig": { "access": "public" }, diff --git a/plugins/hic/package.json b/plugins/hic/package.json index 22549a30f5..6692d8001f 100644 --- a/plugins/hic/package.json +++ b/plugins/hic/package.json @@ -37,18 +37,18 @@ }, "dependencies": { "@mui/x-charts-vendor": "^7.12.0", - "hic-straw": "^2.0.3" - }, - "peerDependencies": { + "hic-straw": "^2.0.3", "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-linear-genome-view": "^3.0.0", "@mui/material": "^6.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", "rxjs": "^7.0.0" }, + "peerDependencies": { + "react": ">=16.8.0" + }, "distModule": "esm/index.js", "srcModule": "src/index.ts", "module": "", diff --git a/plugins/jobs-management/package.json b/plugins/jobs-management/package.json index 33f695549f..98536c9c60 100644 --- a/plugins/jobs-management/package.json +++ b/plugins/jobs-management/package.json @@ -37,17 +37,17 @@ }, "dependencies": { "@jbrowse/text-indexing": "^3.0.0", - "@mui/icons-material": "^6.0.0" - }, - "peerDependencies": { + "@mui/icons-material": "^6.0.0", "@jbrowse/core": "^3.0.0", "@mui/material": "^6.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=16.8.0" + }, "distModule": "esm/index.js", "srcModule": "src/index.ts", "module": "", diff --git a/plugins/legacy-jbrowse/package.json b/plugins/legacy-jbrowse/package.json index 3774e9208f..6eda4ae7e1 100644 --- a/plugins/legacy-jbrowse/package.json +++ b/plugins/legacy-jbrowse/package.json @@ -40,9 +40,7 @@ "crc": "^4.0.0", "generic-filehandle2": "^1.0.0", "get-value": "^3.0.0", - "set-value": "^4.0.1" - }, - "peerDependencies": { + "set-value": "^4.0.1", "@jbrowse/core": "^3.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", diff --git a/plugins/linear-comparative-view/package.json b/plugins/linear-comparative-view/package.json index 81c1961638..895fd67739 100644 --- a/plugins/linear-comparative-view/package.json +++ b/plugins/linear-comparative-view/package.json @@ -38,9 +38,7 @@ "dependencies": { "@mui/icons-material": "^6.0.0", "copy-to-clipboard": "^3.3.1", - "file-saver": "^2.0.0" - }, - "peerDependencies": { + "file-saver": "^2.0.0", "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-alignments": "^3.0.0", "@jbrowse/plugin-linear-genome-view": "^3.0.0", @@ -48,11 +46,13 @@ "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", - "react-dom": ">=16.8.0", "rxjs": "^7.0.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=16.8.0", + "react-dom": ">=16.8.0" + }, "distModule": "esm/index.js", "srcModule": "src/index.ts", "module": "", diff --git a/plugins/linear-genome-view/package.json b/plugins/linear-genome-view/package.json index fe83caac7a..a1fc6b8b61 100644 --- a/plugins/linear-genome-view/package.json +++ b/plugins/linear-genome-view/package.json @@ -38,22 +38,22 @@ "useSrc": "node ../../scripts/useSrc.js" }, "dependencies": { + "@jbrowse/core": "^3.0.0", "@mui/icons-material": "^6.0.0", "@types/file-saver": "^2.0.1", "copy-to-clipboard": "^3.3.1", "file-saver": "^2.0.0", - "material-ui-popup-state": "^5.0.0" - }, - "peerDependencies": { - "@jbrowse/core": "^3.0.0", + "material-ui-popup-state": "^5.0.0", "@mui/material": "^6.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", - "react-dom": ">=16.8.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=18.0.0", + "react-dom": ">=18.0.0" + }, "publishConfig": { "access": "public" }, diff --git a/plugins/lollipop/package.json b/plugins/lollipop/package.json index 6f395aeced..41bcbfad53 100644 --- a/plugins/lollipop/package.json +++ b/plugins/lollipop/package.json @@ -35,13 +35,15 @@ "build:commonjs": "tsc --build tsconfig.build.commonjs.json", "clean": "rimraf dist esm *.tsbuildinfo" }, - "peerDependencies": { + "dependencies": { "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-linear-genome-view": "^3.0.0", "@mui/material": "^6.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", - "mobx-state-tree": "^5.0.0", + "mobx-state-tree": "^5.0.0" + }, + "peerDependencies": { "react": ">=16.8.0" }, "distModule": "esm/index.js", diff --git a/plugins/menus/package.json b/plugins/menus/package.json index 8d2f9e395b..b0cad716b2 100644 --- a/plugins/menus/package.json +++ b/plugins/menus/package.json @@ -39,18 +39,18 @@ "@mui/icons-material": "^6.0.0", "date-fns": "^4.1.0", "pluralize": "^8.0.0", - "react-dropzone": "^14.2.1" - }, - "peerDependencies": { + "react-dropzone": "^14.2.1", "@jbrowse/core": "^3.0.0", "@mui/material": "^6.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", - "react-dom": ">=16.8.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=16.8.0", + "react-dom": ">=16.8.0" + }, "distModule": "esm/index.js", "srcModule": "src/index.ts", "module": "", diff --git a/plugins/rdf/package.json b/plugins/rdf/package.json index bd0f9c765f..fa6d31ecb1 100644 --- a/plugins/rdf/package.json +++ b/plugins/rdf/package.json @@ -36,9 +36,7 @@ "clean": "rimraf dist esm *.tsbuildinfo" }, "dependencies": { - "string-template": "^1.0.0" - }, - "peerDependencies": { + "string-template": "^1.0.0", "@jbrowse/core": "^3.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", diff --git a/plugins/sequence/package.json b/plugins/sequence/package.json index 5452cc7c0c..ca0a782388 100644 --- a/plugins/sequence/package.json +++ b/plugins/sequence/package.json @@ -38,9 +38,7 @@ "dependencies": { "@gmod/abortable-promise-cache": "^2.0.0", "@gmod/indexedfasta": "^3.0.0", - "@gmod/twobit": "^4.0.1" - }, - "peerDependencies": { + "@gmod/twobit": "^4.0.1", "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-linear-genome-view": "^3.0.0", "@jbrowse/plugin-wiggle": "^3.0.0", @@ -48,9 +46,11 @@ "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", "rxjs": "^7.0.0" }, + "peerDependencies": { + "react": ">=16.8.0" + }, "publishConfig": { "access": "public" }, diff --git a/plugins/spreadsheet-view/package.json b/plugins/spreadsheet-view/package.json index 7be29ee28d..ffbd5e7efe 100644 --- a/plugins/spreadsheet-view/package.json +++ b/plugins/spreadsheet-view/package.json @@ -39,9 +39,7 @@ "@gmod/bgzf-filehandle": "^2.0.1", "@gmod/vcf": "^6.0.0", "@jbrowse/plugin-variants": "^3.0.0", - "@mui/icons-material": "^6.0.0" - }, - "peerDependencies": { + "@mui/icons-material": "^6.0.0", "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-linear-genome-view": "^3.0.0", "@mui/material": "^6.0.0", @@ -49,11 +47,13 @@ "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", - "react-dom": ">=16.8.0", "rxjs": "^7.0.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=16.8.0", + "react-dom": ">=16.8.0" + }, "distModule": "esm/index.js", "srcModule": "src/index.ts", "module": "", diff --git a/plugins/sv-inspector/package.json b/plugins/sv-inspector/package.json index 2d1f814f3c..6616d7c817 100644 --- a/plugins/sv-inspector/package.json +++ b/plugins/sv-inspector/package.json @@ -37,9 +37,7 @@ }, "dependencies": { "@jbrowse/sv-core": "^3.0.0", - "@mui/icons-material": "^6.0.0" - }, - "peerDependencies": { + "@mui/icons-material": "^6.0.0", "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-circular-view": "^3.0.0", "@jbrowse/plugin-spradsheet-view": "^3.0.0", @@ -47,10 +45,12 @@ "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", - "react-dom": ">=16.8.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=16.8.0", + "react-dom": ">=16.8.0" + }, "distModule": "esm/index.js", "srcModule": "src/index.ts", "module": "", diff --git a/plugins/svg/package.json b/plugins/svg/package.json index 03b89302e2..cd9f84e890 100644 --- a/plugins/svg/package.json +++ b/plugins/svg/package.json @@ -35,12 +35,14 @@ "build:commonjs": "tsc --build tsconfig.build.commonjs.json", "clean": "rimraf dist esm *.tsbuildinfo" }, - "peerDependencies": { + "dependencies": { "@jbrowse/core": "^3.0.0", "@mui/material": "^6.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", - "mobx-state-tree": "^5.0.0", + "mobx-state-tree": "^5.0.0" + }, + "peerDependencies": { "react": ">=16.8.0" }, "publishConfig": { diff --git a/plugins/text-indexing/package.json b/plugins/text-indexing/package.json index 08dac160ff..358f55445e 100644 --- a/plugins/text-indexing/package.json +++ b/plugins/text-indexing/package.json @@ -36,13 +36,13 @@ "clean": "rimraf dist esm *.tsbuildinfo" }, "dependencies": { - "@jbrowse/text-indexing": "^3.0.0" - }, - "peerDependencies": { + "@jbrowse/text-indexing": "^3.0.0", "@jbrowse/core": "^3.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", - "mobx-state-tree": "^5.0.0", + "mobx-state-tree": "^5.0.0" + }, + "peerDependencies": { "react": ">=16.8.0" }, "distModule": "esm/index.js", diff --git a/plugins/trix/package.json b/plugins/trix/package.json index b5294d7a4a..0163137a1a 100644 --- a/plugins/trix/package.json +++ b/plugins/trix/package.json @@ -36,15 +36,15 @@ "clean": "rimraf dist esm *.tsbuildinfo" }, "peerDependencies": { + "react": ">=16.8.0" + }, + "dependencies": { + "@gmod/trix": "^3.0.0", "@jbrowse/core": "^3.0.0", "@mui/material": "^6.0.0", "mobx": "^6.0.0", "mobx-react": "^9.0.0", - "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0" - }, - "dependencies": { - "@gmod/trix": "^3.0.0" + "mobx-state-tree": "^5.0.0" }, "publishConfig": { "access": "public" diff --git a/plugins/variants/package.json b/plugins/variants/package.json index d718b297ff..de4683a059 100644 --- a/plugins/variants/package.json +++ b/plugins/variants/package.json @@ -42,9 +42,7 @@ "@gmod/vcf": "^6.0.0", "@jbrowse/sv-core": "^3.0.0", "@mui/icons-material": "^6.0.0", - "@mui/x-data-grid": "^7.0.0" - }, - "peerDependencies": { + "@mui/x-data-grid": "^7.0.0", "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-circular-view": "^3.0.0", "@jbrowse/plugin-linear-genome-view": "^3.0.0", @@ -52,10 +50,12 @@ "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", "rxjs": "^7.0.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=16.8.0" + }, "publishConfig": { "access": "public" }, diff --git a/plugins/wiggle/package.json b/plugins/wiggle/package.json index 278d92ff4d..739ae16839 100644 --- a/plugins/wiggle/package.json +++ b/plugins/wiggle/package.json @@ -42,9 +42,7 @@ "@mui/x-data-grid": "^7.0.0", "fast-deep-equal": "^3.1.3", "react-d3-axis-mod": "^0.1.9", - "react-draggable": "^4.4.5" - }, - "peerDependencies": { + "react-draggable": "^4.4.5", "@jbrowse/core": "^3.0.0", "@jbrowse/plugin-data-management": "^3.0.0", "@jbrowse/plugin-linear-genome-view": "^3.0.0", @@ -52,10 +50,12 @@ "mobx": "^6.0.0", "mobx-react": "^9.0.0", "mobx-state-tree": "^5.0.0", - "react": ">=16.8.0", "rxjs": "^7.0.0", "tss-react": "^4.0.0" }, + "peerDependencies": { + "react": ">=16.8.0" + }, "publishConfig": { "access": "public" },