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Create examples of loading nextstrain data #85

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cmdcolin opened this issue Dec 19, 2024 · 1 comment

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cmdcolin commented Dec 19, 2024

Several nextstrain datasets publish the sequence alignments and tree's in their entirety

See the ".zst" files here (zstd is a compression format, but the contents are just msa aligned fasta)

https://nextstrain.org/dengue/all/genome

We could load these data in react-msaview

Contributor Author

cmdcolin commented Dec 19, 2024

See also the treenome browser ...a very interesting demo

https://docs.taxonium.org/en/latest/treenome.html

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