Parsing LTR_FINDER GFF..Missing mapfile,

[minhasbushra]

Hi, I am getting this whole processing repeat craft. will it effect the results?

Step 1: Reformating GFF...
Parsing LTR_FINDER GFF...
Step 2: Labelling short TEs...
Missing mapfile, use unite size for all TEs except simple repeat, low complexity and satellite.
'PLE' is not in the mapfile. Skip filtering PLE'Retroposon' is not in the mapfile. Skip filtering RetroposonStep 3: Labelling LTR groups...
Updated LTR.gff with LTRgroup attribute to:ltrfinder_reformat.gffStep 4: Labelling TE groups...(loose mode)
Progress:1688712/1688713...Step 5: Merging GFF records by labels...
Step 6: Writing stat file..Removing tmp files...

thanks