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newB question - can I get the "reference" genome for a tax ID? #192

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RichardCorbett opened this issue Mar 22, 2022 · 0 comments
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@RichardCorbett
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Hi again.

With this command I get 77 fastas returned:
ncbi-genome-download -t 64187 -F fasta,assembly-report -l complete all --flat-output -H

I was hoping to see a way to select for the "canonical" or "reference" fasta, but I don't see anything in the assembly_report.txt files to indicate tiers or importance between the samples. Is there any magic sauce I can apply here?

thanks!

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