From a8410ba90d3fa061ae4952abd6d2e3d002fc8653 Mon Sep 17 00:00:00 2001
From: Robin <robin.janssen@stud.uni-heidelberg.de>
Date: Thu, 26 Sep 2024 15:18:24 +0200
Subject: [PATCH] update poetry lock file

---
 poetry.lock    | 468 ++++++++++++++++++++++++-------------------------
 pyproject.toml |  23 ++-
 2 files changed, 240 insertions(+), 251 deletions(-)

diff --git a/poetry.lock b/poetry.lock
index 19a8934..0242d5e 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -210,59 +210,59 @@ typing = ["typing-extensions (>=4.12.2)"]
 
 [[package]]
 name = "fonttools"
-version = "4.54.0"
+version = "4.54.1"
 description = "Tools to manipulate font files"
 optional = false
 python-versions = ">=3.8"
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 [package.dependencies]
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 cycler = ">=0.10"
 fonttools = ">=4.22.0"
 kiwisolver = ">=1.3.1"
-numpy = ">=1.21"
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 packaging = ">=20.0"
 pillow = ">=8"
 pyparsing = ">=2.3.1"
 python-dateutil = ">=2.7"
 
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-[package.dependencies]
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-tbb = "==2021.*"
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 [[package]]
 name = "mpmath"
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 [[package]]
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+    {file = "torch-2.4.1-cp310-cp310-manylinux1_x86_64.whl", hash = "sha256:362f82e23a4cd46341daabb76fba08f04cd646df9bfaf5da50af97cb60ca4971"},
+    {file = "torch-2.4.1-cp310-cp310-manylinux2014_aarch64.whl", hash = "sha256:e8ac1985c3ff0f60d85b991954cfc2cc25f79c84545aead422763148ed2759e3"},
+    {file = "torch-2.4.1-cp310-cp310-win_amd64.whl", hash = "sha256:91e326e2ccfb1496e3bee58f70ef605aeb27bd26be07ba64f37dcaac3d070ada"},
+    {file = "torch-2.4.1-cp310-none-macosx_11_0_arm64.whl", hash = "sha256:d36a8ef100f5bff3e9c3cea934b9e0d7ea277cb8210c7152d34a9a6c5830eadd"},
+    {file = "torch-2.4.1-cp311-cp311-manylinux1_x86_64.whl", hash = "sha256:0b5f88afdfa05a335d80351e3cea57d38e578c8689f751d35e0ff36bce872113"},
+    {file = "torch-2.4.1-cp311-cp311-manylinux2014_aarch64.whl", hash = "sha256:ef503165f2341942bfdf2bd520152f19540d0c0e34961232f134dc59ad435be8"},
+    {file = "torch-2.4.1-cp311-cp311-win_amd64.whl", hash = "sha256:092e7c2280c860eff762ac08c4bdcd53d701677851670695e0c22d6d345b269c"},
+    {file = "torch-2.4.1-cp311-none-macosx_11_0_arm64.whl", hash = "sha256:ddddbd8b066e743934a4200b3d54267a46db02106876d21cf31f7da7a96f98ea"},
+    {file = "torch-2.4.1-cp312-cp312-manylinux1_x86_64.whl", hash = "sha256:fdc4fe11db3eb93c1115d3e973a27ac7c1a8318af8934ffa36b0370efe28e042"},
+    {file = "torch-2.4.1-cp312-cp312-manylinux2014_aarch64.whl", hash = "sha256:18835374f599207a9e82c262153c20ddf42ea49bc76b6eadad8e5f49729f6e4d"},
+    {file = "torch-2.4.1-cp312-cp312-win_amd64.whl", hash = "sha256:ebea70ff30544fc021d441ce6b219a88b67524f01170b1c538d7d3ebb5e7f56c"},
+    {file = "torch-2.4.1-cp312-none-macosx_11_0_arm64.whl", hash = "sha256:72b484d5b6cec1a735bf3fa5a1c4883d01748698c5e9cfdbeb4ffab7c7987e0d"},
+    {file = "torch-2.4.1-cp38-cp38-manylinux1_x86_64.whl", hash = "sha256:c99e1db4bf0c5347107845d715b4aa1097e601bdc36343d758963055e9599d93"},
+    {file = "torch-2.4.1-cp38-cp38-manylinux2014_aarch64.whl", hash = "sha256:b57f07e92858db78c5b72857b4f0b33a65b00dc5d68e7948a8494b0314efb880"},
+    {file = "torch-2.4.1-cp38-cp38-win_amd64.whl", hash = "sha256:f18197f3f7c15cde2115892b64f17c80dbf01ed72b008020e7da339902742cf6"},
+    {file = "torch-2.4.1-cp38-none-macosx_11_0_arm64.whl", hash = "sha256:5fc1d4d7ed265ef853579caf272686d1ed87cebdcd04f2a498f800ffc53dab71"},
+    {file = "torch-2.4.1-cp39-cp39-manylinux1_x86_64.whl", hash = "sha256:40f6d3fe3bae74efcf08cb7f8295eaddd8a838ce89e9d26929d4edd6d5e4329d"},
+    {file = "torch-2.4.1-cp39-cp39-manylinux2014_aarch64.whl", hash = "sha256:c9299c16c9743001ecef515536ac45900247f4338ecdf70746f2461f9e4831db"},
+    {file = "torch-2.4.1-cp39-cp39-win_amd64.whl", hash = "sha256:6bce130f2cd2d52ba4e2c6ada461808de7e5eccbac692525337cfb4c19421846"},
+    {file = "torch-2.4.1-cp39-none-macosx_11_0_arm64.whl", hash = "sha256:a38de2803ee6050309aac032676536c3d3b6a9804248537e38e098d0e14817ec"},
 ]
 
 [package.dependencies]
 filelock = "*"
 fsspec = "*"
 jinja2 = "*"
-mkl = {version = ">=2021.1.1,<=2021.4.0", markers = "platform_system == \"Windows\""}
 networkx = "*"
 nvidia-cublas-cu12 = {version = "12.1.3.1", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
 nvidia-cuda-cupti-cu12 = {version = "12.1.105", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
 nvidia-cuda-nvrtc-cu12 = {version = "12.1.105", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
 nvidia-cuda-runtime-cu12 = {version = "12.1.105", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
-nvidia-cudnn-cu12 = {version = "8.9.2.26", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
+nvidia-cudnn-cu12 = {version = "9.1.0.70", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
 nvidia-cufft-cu12 = {version = "11.0.2.54", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
 nvidia-curand-cu12 = {version = "10.3.2.106", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
 nvidia-cusolver-cu12 = {version = "11.4.5.107", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
 nvidia-cusparse-cu12 = {version = "12.1.0.106", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
 nvidia-nccl-cu12 = {version = "2.20.5", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
 nvidia-nvtx-cu12 = {version = "12.1.105", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\""}
+setuptools = "*"
 sympy = "*"
-triton = {version = "2.3.0", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\" and python_version < \"3.12\""}
+triton = {version = "3.0.0", markers = "platform_system == \"Linux\" and platform_machine == \"x86_64\" and python_version < \"3.13\""}
 typing-extensions = ">=4.8.0"
 
 [package.extras]
 opt-einsum = ["opt-einsum (>=3.3)"]
-optree = ["optree (>=0.9.1)"]
+optree = ["optree (>=0.11.0)"]
 
 [[package]]
 name = "torchode"
@@ -1361,13 +1354,13 @@ typeguard = ">=2.11.1,<3"
 
 [[package]]
 name = "tqdm"
-version = "4.66.4"
+version = "4.66.5"
 description = "Fast, Extensible Progress Meter"
 optional = false
 python-versions = ">=3.7"
 files = [
-    {file = "tqdm-4.66.4-py3-none-any.whl", hash = "sha256:b75ca56b413b030bc3f00af51fd2c1a1a5eac6a0c1cca83cbb37a5c52abce644"},
-    {file = "tqdm-4.66.4.tar.gz", hash = "sha256:e4d936c9de8727928f3be6079590e97d9abfe8d39a590be678eb5919ffc186bb"},
+    {file = "tqdm-4.66.5-py3-none-any.whl", hash = "sha256:90279a3770753eafc9194a0364852159802111925aa30eb3f9d85b0e805ac7cd"},
+    {file = "tqdm-4.66.5.tar.gz", hash = "sha256:e1020aef2e5096702d8a025ac7d16b1577279c9d63f8375b63083e9a5f0fcbad"},
 ]
 
 [package.dependencies]
@@ -1381,17 +1374,16 @@ telegram = ["requests"]
 
 [[package]]
 name = "triton"
-version = "2.3.0"
+version = "3.0.0"
 description = "A language and compiler for custom Deep Learning operations"
 optional = false
 python-versions = "*"
 files = [
-    {file = "triton-2.3.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:5ce4b8ff70c48e47274c66f269cce8861cf1dc347ceeb7a67414ca151b1822d8"},
-    {file = "triton-2.3.0-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:3c3d9607f85103afdb279938fc1dd2a66e4f5999a58eb48a346bd42738f986dd"},
-    {file = "triton-2.3.0-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:218d742e67480d9581bafb73ed598416cc8a56f6316152e5562ee65e33de01c0"},
-    {file = "triton-2.3.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:381ec6b3dac06922d3e4099cfc943ef032893b25415de295e82b1a82b0359d2c"},
-    {file = "triton-2.3.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:038e06a09c06a164fef9c48de3af1e13a63dc1ba3c792871e61a8e79720ea440"},
-    {file = "triton-2.3.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:6d8f636e0341ac348899a47a057c3daea99ea7db31528a225a3ba4ded28ccc65"},
+    {file = "triton-3.0.0-1-cp310-cp310-manylinux2014_x86_64.manylinux_2_17_x86_64.whl", hash = "sha256:e1efef76935b2febc365bfadf74bcb65a6f959a9872e5bddf44cc9e0adce1e1a"},
+    {file = "triton-3.0.0-1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl", hash = "sha256:5ce8520437c602fb633f1324cc3871c47bee3b67acf9756c1a66309b60e3216c"},
+    {file = "triton-3.0.0-1-cp312-cp312-manylinux2014_x86_64.manylinux_2_17_x86_64.whl", hash = "sha256:34e509deb77f1c067d8640725ef00c5cbfcb2052a1a3cb6a6d343841f92624eb"},
+    {file = "triton-3.0.0-1-cp38-cp38-manylinux2014_x86_64.manylinux_2_17_x86_64.whl", hash = "sha256:bcbf3b1c48af6a28011a5c40a5b3b9b5330530c3827716b5fbf6d7adcc1e53e9"},
+    {file = "triton-3.0.0-1-cp39-cp39-manylinux2014_x86_64.manylinux_2_17_x86_64.whl", hash = "sha256:6e5727202f7078c56f91ff13ad0c1abab14a0e7f2c87e91b12b6f64f3e8ae609"},
 ]
 
 [package.dependencies]
@@ -1399,8 +1391,8 @@ filelock = "*"
 
 [package.extras]
 build = ["cmake (>=3.20)", "lit"]
-tests = ["autopep8", "flake8", "isort", "numpy", "pytest", "scipy (>=1.7.1)", "torch"]
-tutorials = ["matplotlib", "pandas", "tabulate", "torch"]
+tests = ["autopep8", "flake8", "isort", "llnl-hatchet", "numpy", "pytest", "scipy (>=1.7.1)"]
+tutorials = ["matplotlib", "pandas", "tabulate"]
 
 [[package]]
 name = "typeguard"
@@ -1451,4 +1443,4 @@ test = ["covdefaults (>=2.3)", "coverage (>=7.2.7)", "coverage-enable-subprocess
 [metadata]
 lock-version = "2.0"
 python-versions = "^3.10"
-content-hash = "6ecc6189e4e955d4bf60f76ce0c80d05d63cc99220a0835542c750fbc291ab81"
+content-hash = "fa7ca3921235a83e918658c668b18b26d6597869b7ab5459d3b5e88452b5abee"
diff --git a/pyproject.toml b/pyproject.toml
index c2a87f5..645e9fe 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -13,24 +13,21 @@ classifiers = [
 
 [tool.poetry.dependencies]
 python = "^3.10"
-numpy = "1.26.4"
-h5py = "3.9.0"
-matplotlib = "3.8.4"
-PyYAML = "6.0.1"
-scipy = "1.14.1"
-tabulate = "0.9.0"
-torch = "2.3.0"
+numpy = "^1.26.4"
+h5py = "^3.9.0"
+matplotlib = "^3.8.4"
+PyYAML = "^6.0.1"
+scipy = "^1.14.1"
+tabulate = "^0.9.0"
+torch = "^2.3.0"
 torchode = "0.2.0"
-tqdm = "4.66.4"
+tqdm = "^4.66.4"
 
 [tool.poetry.group.dev.dependencies]
-black = "24.8.0"
+black = "^24.8.0"
 isort = "^5.13.2"
 pre-commit = "^3.8.0"
-pytest = "^8.3.3"  # Moved from optional-dependencies
-sphinx = "^7.2.0"  # Moved from optional-dependencies for docs
-sphinx_mdinclude = "^0.5.0"
-sphinx_rtd_theme = "^1.2.2"
+# pytest = "^8.3.3" 
 
 [tool.pytest.ini_options]
 testpaths = [